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Showing posts with the label Bioinformatics
Trouble With Stacked Bar Graph Without Pooling

Trouble With Stacked Bar Graph Without Pooling

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I have a clear idea of what I would like to plot, but I am not sure where to start using matplotlib… Read more Trouble With Stacked Bar Graph Without Pooling
Pyparsing: Extract Variable Length, Variable Content, Variable Whitespace Substring

Pyparsing: Extract Variable Length, Variable Content, Variable Whitespace Substring

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I need to extract Gleason scores from a flat file of prostatectomy final diagnostic write-ups. Thes… Read more Pyparsing: Extract Variable Length, Variable Content, Variable Whitespace Substring
Can I Use K-means Algorithm On A String?

Can I Use K-means Algorithm On A String?

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I am working on a python project where I study RNA structure evolution (represented as a string for… Read more Can I Use K-means Algorithm On A String?
Why R Library 'ssw' Cannot Find Python Module Installed Via Pip3, Although Pip3 Module Installation Is Satisfied?

Why R Library 'ssw' Cannot Find Python Module Installed Via Pip3, Although Pip3 Module Installation Is Satisfied?

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I am on Ubuntu 20.04.1 LTS focal, and using R. I want to install in R a library to perform local se… Read more Why R Library 'ssw' Cannot Find Python Module Installed Via Pip3, Although Pip3 Module Installation Is Satisfied?
Getting Intersection Of Two Lists In Python

Getting Intersection Of Two Lists In Python

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I have two lists of genes that i'm analyzing. Essentially I want to sort the elements of these … Read more Getting Intersection Of Two Lists In Python
Finding Common Id's (intersection) In Two Dictionaries

Finding Common Id's (intersection) In Two Dictionaries

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I wrote a piece of code that is supposed to find common intersecting ID's in line[1] in two dif… Read more Finding Common Id's (intersection) In Two Dictionaries